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  5. Kfl00024_0200

Kfl00024_0200 (kfl00024_0200_v1.1)


Aliases : kfl00024_0200_v1.1

Description : (at4g00800 : 554.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024); Has 298 Blast hits to 228 proteins in 78 species: Archae - 0; Bacteria - 17; Metazoa - 93; Fungi - 89; Plants - 34; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 1108.0) & (original description: no original description)


Gene families : OG_42_0005340 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00024_0200
Cluster HCCA clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Pp1s193_48V6 No alias vacuolar protein sorting 8 homolog 0.02 Orthogroups_2024-Update
Sobic.004G023100.1 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
MF GO:0031419 cobalamin binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR025941 Vps8_central_dom 1025 1225
No external refs found!