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  5. Kfl00048_0170

Kfl00048_0170 (kfl00048_0170_v1.1)


Aliases : kfl00048_0170_v1.1

Description : (at3g12380 : 538.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP gene family.; actin-related protein 5 (ARP5); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1). & (p20904|act_volca : 107.0) Actin - Volvox carteri & (reliability: 1076.0) & (original description: no original description)


Gene families : OG_42_0007229 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00048_0170
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G012150.5 No alias component *(ARP5) of INO80 chromatin remodeling complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0001401 mitochondrial sorting and assembly machinery complex IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098799 outer mitochondrial membrane protein complex IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 608 733
IPR004000 Actin 37 236
No external refs found!