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  5. Kfl00059_0230

Kfl00059_0230 (kfl00059_0230_v1.1)


Aliases : kfl00059_0230_v1.1

Description : (at5g61380 : 198.0) Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.; TIMING OF CAB EXPRESSION 1 (TOC1); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q689g9|prr1_orysa : 176.0) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 396.0) & (original description: no original description)


Gene families : OG_42_0004519 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004519_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00059_0230
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_15373 No alias two-component response regulator-like aprr1 0.03 Orthogroups_2024-Update
At5g61380 No alias Two-component response regulator-like APRR1... 0.02 Orthogroups_2024-Update
Bradi3g48880 No alias CCT motif -containing response regulator protein 0.02 Orthogroups_2024-Update
Glyma.04G166300 No alias CCT motif -containing response regulator protein 0.02 Orthogroups_2024-Update
Glyma.06G196200 No alias CCT motif -containing response regulator protein 0.02 Orthogroups_2024-Update
Glyma.17G102200 No alias CCT motif -containing response regulator protein 0.02 Orthogroups_2024-Update
LOC_Os02g40510 No alias response regulator receiver domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp3g09460.1 No alias circadian clock evening oscillator component TOC1 of... 0.02 Orthogroups_2024-Update
PSME_00042813-RA No alias (q689g9|prr1_orysa : 289.0) Two-component response... 0.02 Orthogroups_2024-Update
Solyc03g115770 No alias Timing of cab expression 1/pseudo-response regulator 1... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 19 130
IPR010402 CCT_domain 676 718
No external refs found!