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  5. Kfl00059_0280

Kfl00059_0280 (kfl00059_0280_v1.1)


Aliases : kfl00059_0280_v1.1

Description : (at3g56940 : 584.0) Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.; COPPER RESPONSE DEFECT 1 (CRD1); FUNCTIONS IN: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, DNA binding; INVOLVED IN: chlorophyll biosynthetic process, oxidation reduction, photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase (InterPro:IPR008434), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Rubrerythrin (InterPro:IPR003251). & (q6sjv8|crd1_goshi : 577.0) Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) - Gossypium hirsutum (Upland cotton) & (reliability: 1168.0) & (original description: no original description)


Gene families : OG_42_0005006 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005006_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00059_0280
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
89989 No alias dicarboxylate diiron protein, putative (Crd1) 0.03 Orthogroups_2024-Update
A4A49_38146 No alias magnesium-protoporphyrin ix monomethyl ester [oxidative]... 0.04 Orthogroups_2024-Update
At3g56940 No alias Magnesium-protoporphyrin IX monomethyl ester [oxidative]... 0.07 Orthogroups_2024-Update
Brara.I03920.1 No alias catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.03 Orthogroups_2024-Update
Cre12.g510050 No alias dicarboxylate diiron protein, putative (Crd1) 0.05 Orthogroups_2024-Update
Glyma.03G119500 No alias dicarboxylate diiron protein, putative (Crd1) 0.02 Orthogroups_2024-Update
Glyma.19G123800 No alias dicarboxylate diiron protein, putative (Crd1) 0.03 Orthogroups_2024-Update
HORVU3Hr1G039930.2 No alias catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.03 Orthogroups_2024-Update
LOC_Os01g17170 No alias magnesium-protoporphyrin IX monomethyl ester... 0.03 Orthogroups_2024-Update
Mp5g03060.1 No alias catalytic component CRD1 of Mg-protoporphyrin IX... 0.03 Orthogroups_2024-Update
Potri.016G025000 No alias dicarboxylate diiron protein, putative (Crd1) 0.04 Orthogroups_2024-Update
Pp1s239_18V6 No alias magnesium-protoporphyrin ix monomethyl ester 0.05 Orthogroups_2024-Update
Pp1s97_248V6 No alias magnesium-protoporphyrin ix monomethyl ester 0.02 Orthogroups_2024-Update
Seita.5G040100.1 No alias catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.05 Orthogroups_2024-Update
Sobic.003G132100.1 No alias catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.04 Orthogroups_2024-Update
Solyc10g077040 No alias putative magnesium-protoporphyrin monomethyl ester cyclase 0.02 Orthogroups_2024-Update
Sopen10g028720 No alias Rubrerythrin 0.03 Orthogroups_2024-Update
evm.model.tig00000254.95 No alias (q9ld46|crd1_chlre : 392.0) Magnesium-protoporphyrin IX... 0.02 Orthogroups_2024-Update
evm.model.tig00001409.14 No alias (at3g56940 : 348.0) Encodes a putative ZIP protein with... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
BP GO:0007160 cell-matrix adhesion IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009235 cobalamin metabolic process IEP Predicted GO
BP GO:0009236 cobalamin biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
BP GO:0031589 cell-substrate adhesion IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003251 Rubrerythrin 156 289
No external refs found!