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  5. Kfl00079_0240

Kfl00079_0240 (kfl00079_0240_v1.1)


Aliases : kfl00079_0240_v1.1

Description : (p18068|plas_chlre : 158.0) Plastocyanin, chloroplast precursor (PC6-2) - Chlamydomonas reinhardtii & (at1g20340 : 135.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description)


Gene families : OG_42_0005261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00079_0240
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
A4A49_10556 No alias plastocyanin, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_38053 No alias plastocyanin, chloroplastic 0.03 Orthogroups_2024-Update
Bradi1g52460 No alias plastocyanin 1 0.04 Orthogroups_2024-Update
Glyma.04G020300 No alias Cupredoxin superfamily protein 0.06 Orthogroups_2024-Update
Glyma.06G020400 No alias plastocyanin 1 0.03 Orthogroups_2024-Update
HORVU7Hr1G000900.1 No alias plastocyanin electron carrier 0.03 Orthogroups_2024-Update
LOC_Os06g01210 No alias plastocyanin, chloroplast precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427889g0020 No alias (p16002|plas_pea : 186.0) Plastocyanin, chloroplast... 0.01 Orthogroups_2024-Update
Potri.002G016000 No alias plastocyanin 1 0.02 Orthogroups_2024-Update
Pp1s254_25V6 No alias chloroplast precursor 0.03 Orthogroups_2024-Update
Pp1s27_130V6 No alias chloroplast precursor 0.02 Orthogroups_2024-Update
Pp1s3_520V6 No alias chloroplast precursor 0.03 Orthogroups_2024-Update
Seita.4G000900.1 No alias plastocyanin electron carrier 0.06 Orthogroups_2024-Update
Sobic.010G000500.1 No alias plastocyanin electron carrier 0.04 Orthogroups_2024-Update
Solyc04g082010 No alias pre-plastocyanin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0009055 electron transfer activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000923 BlueCu_1 65 159
No external refs found!