Coexpression cluster: Cluster_43 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 7.59% (17/224) 2.26 0.0 4.7e-05
GO:0044464 cell part 12.5% (28/224) 1.56 0.0 6.9e-05
GO:0043043 peptide biosynthetic process 4.91% (11/224) 2.6 2e-06 0.000239
GO:0044424 intracellular part 11.16% (25/224) 1.48 4e-06 0.00024
GO:0005622 intracellular 4.02% (9/224) 2.85 4e-06 0.000241
GO:0043603 cellular amide metabolic process 4.91% (11/224) 2.46 5e-06 0.000241
GO:0006518 peptide metabolic process 4.91% (11/224) 2.56 3e-06 0.000252
GO:0005198 structural molecule activity 4.91% (11/224) 2.47 5e-06 0.000252
GO:0043604 amide biosynthetic process 4.91% (11/224) 2.53 3e-06 0.000256
GO:0003735 structural constituent of ribosome 4.91% (11/224) 2.63 2e-06 0.000257
GO:0044271 cellular nitrogen compound biosynthetic process 7.14% (16/224) 1.91 6e-06 0.000263
GO:0006412 translation 4.46% (10/224) 2.51 1.1e-05 0.000337
GO:0005840 ribosome 4.46% (10/224) 2.51 1.1e-05 0.000337
GO:1990904 ribonucleoprotein complex 4.91% (11/224) 2.38 9e-06 0.000346
GO:0044444 cytoplasmic part 6.25% (14/224) 1.96 1.6e-05 0.00045
GO:0032991 protein-containing complex 8.48% (19/224) 1.62 1.5e-05 0.000458
GO:0043232 intracellular non-membrane-bounded organelle 4.46% (10/224) 2.24 5.4e-05 0.001337
GO:0043228 non-membrane-bounded organelle 4.46% (10/224) 2.24 5.4e-05 0.001337
GO:0044249 cellular biosynthetic process 8.04% (18/224) 1.43 0.000138 0.003254
GO:0043226 organelle 5.8% (13/224) 1.68 0.000226 0.004606
GO:1901576 organic substance biosynthetic process 8.04% (18/224) 1.37 0.000225 0.004812
GO:0043229 intracellular organelle 5.8% (13/224) 1.69 0.000219 0.00491
GO:0000413 protein peptidyl-prolyl isomerization 1.79% (4/224) 3.63 0.000281 0.005249
GO:0018208 peptidyl-proline modification 1.79% (4/224) 3.63 0.000281 0.005249
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.79% (4/224) 3.57 0.000328 0.005668
GO:0016859 cis-trans isomerase activity 1.79% (4/224) 3.57 0.000328 0.005668
GO:0016835 carbon-oxygen lyase activity 1.34% (3/224) 4.05 0.000704 0.010894
GO:0009058 biosynthetic process 8.04% (18/224) 1.24 0.000662 0.011007
GO:0009987 cellular process 18.75% (42/224) 0.73 0.000692 0.011102
GO:0009523 photosystem II 1.79% (4/224) 3.23 0.000837 0.012526
GO:0044436 thylakoid part 2.23% (5/224) 2.71 0.000991 0.014356
GO:0034645 cellular macromolecule biosynthetic process 4.91% (11/224) 1.53 0.001627 0.022826
GO:1901564 organonitrogen compound metabolic process 10.71% (24/224) 0.93 0.00191 0.025229
GO:0018193 peptidyl-amino acid modification 1.79% (4/224) 2.91 0.00191 0.025992
GO:0009536 plastid 0.89% (2/224) 4.68 0.002424 0.029414
GO:0009507 chloroplast 0.89% (2/224) 4.68 0.002424 0.029414
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 0.89% (2/224) 4.68 0.002424 0.029414
GO:0071840 cellular component organization or biogenesis 3.12% (7/224) 1.93 0.002538 0.029987
GO:0009059 macromolecule biosynthetic process 4.91% (11/224) 1.4 0.003212 0.036981
GO:0022853 active ion transmembrane transporter activity 0.89% (2/224) 4.27 0.004448 0.046443
GO:0019829 cation-transporting ATPase activity 0.89% (2/224) 4.27 0.004448 0.046443
GO:0042625 ATPase coupled ion transmembrane transporter activity 0.89% (2/224) 4.27 0.004448 0.046443
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 0.89% (2/224) 4.27 0.004448 0.046443
GO:0009521 photosystem 1.79% (4/224) 2.57 0.004572 0.046652
GO:0034641 cellular nitrogen compound metabolic process 8.93% (20/224) 0.92 0.004735 0.047246
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_1 0.027 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_43 0.024 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_76 0.038 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_190 0.034 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_37 0.031 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_118 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_163 0.027 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_243 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_12 0.035 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_15 0.023 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_31 0.035 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_57 0.03 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_105 0.032 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_116 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_23 0.033 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_80 0.026 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_15 0.034 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_37 0.046 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_101 0.02 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_5 0.023 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_46 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_100 0.03 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_107 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_7 0.035 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_41 0.054 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_88 0.031 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_160 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_115 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_124 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_212 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_271 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_302 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_442 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_50 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_53 0.035 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_88 0.022 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.03 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_56 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_107 0.043 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0112 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0030 0.055 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0036 0.024 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.041 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0087 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0108 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0138 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_20 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_23 0.043 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_286 0.019 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.039 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_101 0.032 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_158 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_174 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_23 0.028 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_56 0.035 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_63 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_146 0.04 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_3 0.046 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_34 0.036 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_43 0.044 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_110 0.03 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_9 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_19 0.027 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_52 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_63 0.03 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_81 0.021 Orthogroups_2024-Update Compare
Sequences (224) (download table)

InterPro Domains

GO Terms

Family Terms