Coexpression cluster: Cluster_1 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016874 ligase activity 4.31% (5/116) 3.95 1.9e-05 0.006023
GO:0043039 tRNA aminoacylation 2.59% (3/116) 4.34 0.00044 0.017613
GO:0043038 amino acid activation 2.59% (3/116) 4.34 0.00044 0.017613
GO:0004812 aminoacyl-tRNA ligase activity 2.59% (3/116) 4.38 0.000411 0.0219
GO:0003690 double-stranded DNA binding 2.59% (3/116) 4.38 0.000411 0.0219
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.59% (3/116) 4.38 0.000411 0.0219
GO:0042398 cellular modified amino acid biosynthetic process 1.72% (2/116) 5.73 0.00063 0.022397
GO:0042254 ribosome biogenesis 1.72% (2/116) 5.6 0.000754 0.024135
GO:0030983 mismatched DNA binding 1.72% (2/116) 5.38 0.001035 0.025483
GO:0006298 mismatch repair 1.72% (2/116) 5.38 0.001035 0.025483
GO:0022613 ribonucleoprotein complex biogenesis 1.72% (2/116) 5.49 0.000889 0.025872
GO:0044085 cellular component biogenesis 1.72% (2/116) 5.19 0.001359 0.027181
GO:0003746 translation elongation factor activity 1.72% (2/116) 5.19 0.001359 0.027181
GO:0006414 translational elongation 1.72% (2/116) 5.19 0.001359 0.027181
GO:0034641 cellular nitrogen compound metabolic process 9.48% (11/116) 1.5 0.001792 0.033734
GO:0140101 catalytic activity, acting on a tRNA 2.59% (3/116) 3.62 0.001902 0.03381
GO:0005622 intracellular 4.31% (5/116) 2.49 0.002047 0.03447
GO:0016881 acid-amino acid ligase activity 1.72% (2/116) 6.38 0.000243 0.03883
GO:0008535 respiratory chain complex IV assembly 0.86% (1/116) 8.19 0.003433 0.040693
GO:0004592 pantoate-beta-alanine ligase activity 0.86% (1/116) 8.19 0.003433 0.040693
GO:0033108 mitochondrial respiratory chain complex assembly 0.86% (1/116) 8.19 0.003433 0.040693
GO:0000783 nuclear telomere cap complex 0.86% (1/116) 8.19 0.003433 0.040693
GO:0004357 glutamate-cysteine ligase activity 0.86% (1/116) 8.19 0.003433 0.040693
GO:0033617 mitochondrial respiratory chain complex IV assembly 0.86% (1/116) 8.19 0.003433 0.040693
GO:0000782 telomere cap complex 0.86% (1/116) 8.19 0.003433 0.040693
GO:1990879 CST complex 0.86% (1/116) 8.19 0.003433 0.040693
GO:0006418 tRNA aminoacylation for protein translation 2.59% (3/116) 4.41 0.000382 0.040773
GO:0006399 tRNA metabolic process 2.59% (3/116) 3.25 0.003966 0.043766
GO:0044464 cell part 11.21% (13/116) 1.22 0.003895 0.04451
GO:0043604 amide biosynthetic process 4.31% (5/116) 2.23 0.00441 0.04704
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum pennellii HCCA clusters Cluster_18 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_37 0.032 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_46 0.042 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.048 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_71 0.059 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_77 0.027 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_110 0.028 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_144 0.039 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_355 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_7 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_17 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_25 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_97 0.019 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_103 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_118 0.027 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_137 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_12 0.026 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_31 0.027 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_116 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_147 0.027 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_13 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_20 0.023 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_43 0.027 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_203 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_265 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_15 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_32 0.026 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_37 0.033 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_96 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_136 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_137 0.037 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_277 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_280 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_100 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_41 0.035 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.03 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_121 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_160 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_106 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_122 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_140 0.034 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_168 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_173 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_212 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_225 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_258 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_261 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_302 0.033 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_318 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_365 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_417 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_419 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_441 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_445 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_459 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_501 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_514 0.032 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_27 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_45 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_53 0.039 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_63 0.028 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_98 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_125 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_129 0.024 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.031 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_90 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_58 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_70 0.022 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_198 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_199 0.03 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0048 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0099 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0112 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0129 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0011 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0030 0.043 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0035 0.024 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0036 0.034 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.036 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_23 0.033 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_97 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_155 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_235 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_253 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_255 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_262 0.032 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_281 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_286 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_322 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_82 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_158 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_187 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_273 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_6 0.036 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_56 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_129 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_146 0.036 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_148 0.028 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_211 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_222 0.031 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_3 0.062 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_33 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_34 0.043 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_91 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_152 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_195 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_217 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_8 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_76 0.019 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_97 0.026 Orthogroups_2024-Update Compare
Sequences (116) (download table)

InterPro Domains

GO Terms

Family Terms