Coexpression cluster: Cluster_116 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042723 thiamine-containing compound metabolic process 2.78% (2/72) 7.94 1.6e-05 0.000464
GO:0009228 thiamine biosynthetic process 2.78% (2/72) 7.94 1.6e-05 0.000464
GO:0006772 thiamine metabolic process 2.78% (2/72) 7.94 1.6e-05 0.000464
GO:0009113 purine nucleobase biosynthetic process 2.78% (2/72) 7.94 1.6e-05 0.000464
GO:0006144 purine nucleobase metabolic process 2.78% (2/72) 7.94 1.6e-05 0.000464
GO:0004637 phosphoribosylamine-glycine ligase activity 2.78% (2/72) 7.94 1.6e-05 0.000464
GO:0042724 thiamine-containing compound biosynthetic process 2.78% (2/72) 7.94 1.6e-05 0.000464
GO:0046112 nucleobase biosynthetic process 2.78% (2/72) 7.36 4.9e-05 0.00108
GO:0009112 nucleobase metabolic process 2.78% (2/72) 7.36 4.9e-05 0.00108
GO:0072528 pyrimidine-containing compound biosynthetic process 2.78% (2/72) 6.62 0.000161 0.00293
GO:0046148 pigment biosynthetic process 2.78% (2/72) 6.62 0.000161 0.00293
GO:0072527 pyrimidine-containing compound metabolic process 2.78% (2/72) 6.36 0.000241 0.004019
GO:0042440 pigment metabolic process 2.78% (2/72) 6.14 0.000337 0.00518
GO:0044283 small molecule biosynthetic process 5.56% (4/72) 3.39 0.000577 0.006793
GO:0044281 small molecule metabolic process 9.72% (7/72) 2.32 0.000502 0.007169
GO:0044272 sulfur compound biosynthetic process 2.78% (2/72) 5.77 0.000574 0.007177
GO:1901566 organonitrogen compound biosynthetic process 8.33% (6/72) 2.55 0.000564 0.007522
GO:0019438 aromatic compound biosynthetic process 8.33% (6/72) 2.46 0.000763 0.008473
GO:0018130 heterocycle biosynthetic process 8.33% (6/72) 2.43 0.000872 0.009177
GO:1901362 organic cyclic compound biosynthetic process 8.33% (6/72) 2.37 0.001068 0.010676
GO:0009110 vitamin biosynthetic process 2.78% (2/72) 4.94 0.001879 0.016338
GO:0042364 water-soluble vitamin biosynthetic process 2.78% (2/72) 4.94 0.001879 0.016338
GO:0006766 vitamin metabolic process 2.78% (2/72) 4.86 0.002124 0.016991
GO:0006767 water-soluble vitamin metabolic process 2.78% (2/72) 4.86 0.002124 0.016991
GO:0017144 drug metabolic process 4.17% (3/72) 3.62 0.001858 0.0177
GO:0006790 sulfur compound metabolic process 2.78% (2/72) 4.62 0.002944 0.022645
GO:0004417 hydroxyethylthiazole kinase activity 1.39% (1/72) 7.94 0.004059 0.026185
GO:0046365 monosaccharide catabolic process 1.39% (1/72) 7.94 0.004059 0.026185
GO:0019320 hexose catabolic process 1.39% (1/72) 7.94 0.004059 0.026185
GO:0006007 glucose catabolic process 1.39% (1/72) 7.94 0.004059 0.026185
GO:0016879 ligase activity, forming carbon-nitrogen bonds 2.78% (2/72) 4.49 0.00356 0.026374
GO:0046146 tetrahydrobiopterin metabolic process 1.39% (1/72) 6.94 0.008101 0.043789
GO:0034311 diol metabolic process 1.39% (1/72) 6.94 0.008101 0.043789
GO:0004619 phosphoglycerate mutase activity 1.39% (1/72) 6.94 0.008101 0.043789
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 1.39% (1/72) 6.94 0.008101 0.043789
GO:0006729 tetrahydrobiopterin biosynthetic process 1.39% (1/72) 6.94 0.008101 0.043789
GO:0034312 diol biosynthetic process 1.39% (1/72) 6.94 0.008101 0.043789
GO:0009058 biosynthetic process 9.72% (7/72) 1.59 0.008425 0.04434
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_1 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_205 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_71 0.024 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_43 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_121 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_45 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_212 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_302 0.021 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_13 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_23 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_208 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_33 0.034 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_81 0.021 Orthogroups_2024-Update Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms