Coexpression cluster: Cluster_71 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0035639 purine ribonucleoside triphosphate binding 22.0% (22/100) 2.6 0.0 0.0
GO:0097367 carbohydrate derivative binding 22.0% (22/100) 2.4 0.0 0.0
GO:0032553 ribonucleotide binding 22.0% (22/100) 2.41 0.0 0.0
GO:0017076 purine nucleotide binding 22.0% (22/100) 2.41 0.0 0.0
GO:0032555 purine ribonucleotide binding 22.0% (22/100) 2.42 0.0 0.0
GO:0000166 nucleotide binding 22.0% (22/100) 2.28 0.0 0.0
GO:1901265 nucleoside phosphate binding 22.0% (22/100) 2.28 0.0 0.0
GO:0043168 anion binding 22.0% (22/100) 2.22 0.0 0.0
GO:0036094 small molecule binding 22.0% (22/100) 2.21 0.0 0.0
GO:0005488 binding 46.0% (46/100) 1.23 0.0 0.0
GO:0005524 ATP binding 17.0% (17/100) 2.43 0.0 0.0
GO:0008144 drug binding 17.0% (17/100) 2.33 0.0 1e-06
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.0% (5/100) 5.61 0.0 1e-06
GO:0043039 tRNA aminoacylation 5.0% (5/100) 5.61 0.0 1e-06
GO:0043038 amino acid activation 5.0% (5/100) 5.61 0.0 1e-06
GO:0004812 aminoacyl-tRNA ligase activity 5.0% (5/100) 5.61 0.0 1e-06
GO:0097159 organic cyclic compound binding 34.0% (34/100) 1.36 0.0 2e-06
GO:1901363 heterocyclic compound binding 34.0% (34/100) 1.36 0.0 2e-06
GO:0016874 ligase activity 6.0% (6/100) 4.78 0.0 2e-06
GO:0032559 adenyl ribonucleotide binding 17.0% (17/100) 2.23 0.0 2e-06
GO:0030554 adenyl nucleotide binding 17.0% (17/100) 2.23 0.0 2e-06
GO:0003674 molecular_function 56.0% (56/100) 0.86 0.0 2e-06
GO:0140101 catalytic activity, acting on a tRNA 5.0% (5/100) 4.96 1e-06 9e-06
GO:0043167 ion binding 28.0% (28/100) 1.37 2e-06 2.3e-05
GO:0006399 tRNA metabolic process 5.0% (5/100) 4.64 2e-06 2.6e-05
GO:0006082 organic acid metabolic process 7.0% (7/100) 3.57 2e-06 3.1e-05
GO:0006418 tRNA aminoacylation for protein translation 4.0% (4/100) 5.42 2e-06 3.1e-05
GO:0044281 small molecule metabolic process 8.0% (8/100) 3.11 5e-06 5.7e-05
GO:0034660 ncRNA metabolic process 5.0% (5/100) 4.25 7e-06 8.5e-05
GO:0006520 cellular amino acid metabolic process 5.0% (5/100) 4.19 9e-06 0.000101
GO:0016070 RNA metabolic process 7.0% (7/100) 3.13 1.7e-05 0.00019
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 2.0% (2/100) 7.81 2.9e-05 0.000286
GO:0061505 DNA topoisomerase II activity 2.0% (2/100) 7.81 2.9e-05 0.000286
GO:0043436 oxoacid metabolic process 6.0% (6/100) 3.35 2.9e-05 0.0003
GO:0003824 catalytic activity 31.0% (31/100) 1.07 2.9e-05 0.000305
GO:0019752 carboxylic acid metabolic process 6.0% (6/100) 3.36 2.8e-05 0.000306
GO:0003723 RNA binding 6.0% (6/100) 3.19 5.5e-05 0.000521
GO:0017111 nucleoside-triphosphatase activity 7.0% (7/100) 2.8 7.1e-05 0.000655
GO:0016462 pyrophosphatase activity 7.0% (7/100) 2.73 9.4e-05 0.000847
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.0% (7/100) 2.71 0.000103 0.000861
GO:0016817 hydrolase activity, acting on acid anhydrides 7.0% (7/100) 2.71 0.000106 0.000863
GO:0006265 DNA topological change 2.0% (2/100) 7.01 0.000102 0.000874
GO:0003916 DNA topoisomerase activity 2.0% (2/100) 7.01 0.000102 0.000874
GO:0032549 ribonucleoside binding 5.0% (5/100) 3.38 0.000127 0.000928
GO:0032561 guanyl ribonucleotide binding 5.0% (5/100) 3.38 0.000127 0.000928
GO:0005525 GTP binding 5.0% (5/100) 3.38 0.000127 0.000928
GO:0001883 purine nucleoside binding 5.0% (5/100) 3.38 0.000127 0.000928
GO:0032550 purine ribonucleoside binding 5.0% (5/100) 3.38 0.000127 0.000928
GO:0001882 nucleoside binding 5.0% (5/100) 3.37 0.00013 0.000929
GO:0071103 DNA conformation change 2.0% (2/100) 6.81 0.000136 0.000954
GO:0019001 guanyl nucleotide binding 5.0% (5/100) 3.34 0.000144 0.000993
GO:0015979 photosynthesis 3.0% (3/100) 4.73 0.000206 0.001388
GO:1901564 organonitrogen compound metabolic process 15.0% (15/100) 1.47 0.000322 0.002135
GO:0140097 catalytic activity, acting on DNA 3.0% (3/100) 4.44 0.000367 0.002385
GO:0008094 DNA-dependent ATPase activity 2.0% (2/100) 6.01 0.000438 0.002745
GO:0019898 extrinsic component of membrane 2.0% (2/100) 6.01 0.000438 0.002745
GO:0033014 tetrapyrrole biosynthetic process 2.0% (2/100) 5.73 0.000652 0.003943
GO:0016887 ATPase activity 4.0% (4/100) 3.36 0.00065 0.004002
GO:0042623 ATPase activity, coupled 3.0% (3/100) 4.06 0.000803 0.004777
GO:0009654 photosystem II oxygen evolving complex 2.0% (2/100) 5.42 0.001 0.005852
GO:0033013 tetrapyrrole metabolic process 2.0% (2/100) 5.35 0.001099 0.006323
GO:0008150 biological_process 39.0% (39/100) 0.64 0.001376 0.007792
GO:0009523 photosystem II 2.0% (2/100) 5.17 0.001421 0.007916
GO:0044237 cellular metabolic process 26.0% (26/100) 0.86 0.001479 0.00811
GO:1990204 oxidoreductase complex 2.0% (2/100) 5.11 0.001537 0.0083
GO:0003676 nucleic acid binding 17.0% (17/100) 1.13 0.00173 0.009201
GO:1902494 catalytic complex 3.0% (3/100) 3.66 0.001792 0.009386
GO:0006438 valyl-tRNA aminoacylation 1.0% (1/100) 8.81 0.002224 0.010408
GO:0006426 glycyl-tRNA aminoacylation 1.0% (1/100) 8.81 0.002224 0.010408
GO:0004655 porphobilinogen synthase activity 1.0% (1/100) 8.81 0.002224 0.010408
GO:0009439 cyanate metabolic process 1.0% (1/100) 8.81 0.002224 0.010408
GO:0004820 glycine-tRNA ligase activity 1.0% (1/100) 8.81 0.002224 0.010408
GO:0006432 phenylalanyl-tRNA aminoacylation 1.0% (1/100) 8.81 0.002224 0.010408
GO:0004832 valine-tRNA ligase activity 1.0% (1/100) 8.81 0.002224 0.010408
GO:0004826 phenylalanine-tRNA ligase activity 1.0% (1/100) 8.81 0.002224 0.010408
GO:0051276 chromosome organization 2.0% (2/100) 4.81 0.002325 0.01074
GO:0016853 isomerase activity 3.0% (3/100) 3.51 0.002367 0.01079
GO:0008152 metabolic process 31.0% (31/100) 0.71 0.002718 0.012232
GO:0009987 cellular process 27.0% (27/100) 0.78 0.002852 0.012671
GO:0005575 cellular_component 14.0% (14/100) 1.17 0.003473 0.015239
GO:0004853 uroporphyrinogen decarboxylase activity 1.0% (1/100) 7.81 0.004443 0.01879
GO:0009317 acetyl-CoA carboxylase complex 1.0% (1/100) 7.81 0.004443 0.01879
GO:0044464 cell part 9.0% (9/100) 1.51 0.004359 0.018888
GO:0140098 catalytic activity, acting on RNA 5.0% (5/100) 2.19 0.004942 0.02065
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain 1.0% (1/100) 7.23 0.006657 0.026554
GO:0016885 ligase activity, forming carbon-carbon bonds 1.0% (1/100) 7.23 0.006657 0.026554
GO:0016421 CoA carboxylase activity 1.0% (1/100) 7.23 0.006657 0.026554
GO:0003989 acetyl-CoA carboxylase activity 1.0% (1/100) 7.23 0.006657 0.026554
GO:0033180 proton-transporting V-type ATPase, V1 domain 1.0% (1/100) 6.81 0.008867 0.033108
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor 1.0% (1/100) 6.81 0.008867 0.033108
GO:0004784 superoxide dismutase activity 1.0% (1/100) 6.81 0.008867 0.033108
GO:0009521 photosystem 2.0% (2/100) 3.81 0.009025 0.033345
GO:0098796 membrane protein complex 3.0% (3/100) 2.85 0.008519 0.033596
GO:0051536 iron-sulfur cluster binding 2.0% (2/100) 3.84 0.008756 0.033772
GO:0051540 metal cluster binding 2.0% (2/100) 3.84 0.008756 0.033772
GO:0044424 intracellular part 8.0% (8/100) 1.45 0.009247 0.03381
GO:0016787 hydrolase activity 11.0% (11/100) 1.17 0.009914 0.035874
GO:0006511 ubiquitin-dependent protein catabolic process 2.0% (2/100) 3.68 0.010718 0.037249
GO:0043632 modification-dependent macromolecule catabolic process 2.0% (2/100) 3.68 0.010718 0.037249
GO:0019941 modification-dependent protein catabolic process 2.0% (2/100) 3.68 0.010718 0.037249
GO:0006996 organelle organization 2.0% (2/100) 3.7 0.010427 0.037346
GO:0044436 thylakoid part 2.0% (2/100) 3.6 0.011919 0.041015
GO:0000049 tRNA binding 1.0% (1/100) 6.23 0.013271 0.044789
GO:0044437 vacuolar part 1.0% (1/100) 6.23 0.013271 0.044789
GO:0005737 cytoplasm 2.0% (2/100) 3.49 0.013825 0.046214
GO:0044265 cellular macromolecule catabolic process 2.0% (2/100) 3.47 0.014155 0.046432
GO:0044425 membrane part 6.0% (6/100) 1.61 0.014025 0.04644
GO:0051603 proteolysis involved in cellular protein catabolic process 2.0% (2/100) 3.44 0.014824 0.048178
GO:0046961 proton-transporting ATPase activity, rotational mechanism 1.0% (1/100) 6.01 0.015466 0.049349
GO:0036442 proton-exporting ATPase activity 1.0% (1/100) 6.01 0.015466 0.049349
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_1 0.059 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_43 0.082 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_76 0.041 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_113 0.025 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_129 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_190 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_238 0.024 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_248 0.037 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_66 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_68 0.03 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_89 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_128 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_140 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_175 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_3 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_12 0.06 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_116 0.024 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_122 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_20 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_64 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_69 0.029 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_3 0.026 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_23 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_116 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_63 0.031 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_104 0.035 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_137 0.059 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_73 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_69 0.028 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_16 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_41 0.042 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.062 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_84 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_121 0.032 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.044 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_160 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_187 0.019 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_203 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_236 0.037 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_76 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_97 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_260 0.045 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_338 0.035 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_349 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_360 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_365 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_385 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_409 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_426 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_439 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_441 0.052 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_442 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_462 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_497 0.037 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_514 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_75 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_94 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_113 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_119 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_125 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_148 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_160 0.021 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.029 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_117 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_35 0.029 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_65 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_73 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_107 0.032 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_115 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_195 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0068 0.025 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0086 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0025 0.024 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0035 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0036 0.024 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.032 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0065 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0067 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0180 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_23 0.043 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_46 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_57 0.04 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_75 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_94 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_158 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_242 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_286 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_355 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_390 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_28 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_37 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.05 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_107 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_124 0.027 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_204 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_280 0.034 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_1 0.03 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_6 0.042 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_63 0.034 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_65 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_129 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_186 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_222 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_3 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_33 0.057 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_34 0.056 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_54 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_108 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_138 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_161 0.025 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_58 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_81 0.042 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_92 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_106 0.02 Orthogroups_2024-Update Compare
Sequences (100) (download table)

InterPro Domains

GO Terms

Family Terms