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  5. Kfl00090_0160

Kfl00090_0160 (kfl00090_0160_v1.1)


Aliases : kfl00090_0160_v1.1

Description : (at1g56340 : 471.0) Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels.; calreticulin 1a (CRT1a); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to salt stress, calcium ion homeostasis; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1b (TAIR:AT1G09210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40401|calr_nicpl : 471.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 942.0) & (original description: no original description)


Gene families : OG_42_0001219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00090_0160
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
144212 No alias calreticulin 1a 0.02 Orthogroups_2024-Update
At1g09210 No alias Calreticulin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q38858] 0.02 Orthogroups_2024-Update
At1g56340 No alias Calreticulin-1 [Source:UniProtKB/Swiss-Prot;Acc:O04151] 0.02 Orthogroups_2024-Update
Bradi1g02940 No alias calreticulin 1a 0.05 Orthogroups_2024-Update
Bradi2g57537 No alias calreticulin 3 0.06 Orthogroups_2024-Update
Brara.A02267.1 No alias ER luminal lectin chaperone *(CRT) 0.03 Orthogroups_2024-Update
Brara.I01691.1 No alias ER luminal lectin chaperone *(CRT) 0.05 Orthogroups_2024-Update
Cre01.g038400 No alias calreticulin 1b 0.02 Orthogroups_2024-Update
GRMZM2G074687 No alias calreticulin 1a 0.06 Orthogroups_2024-Update
GRMZM2G358059 No alias calreticulin 1a 0.05 Orthogroups_2024-Update
Glyma.10G147600 No alias calreticulin 1b 0.04 Orthogroups_2024-Update
Glyma.11G126100 No alias calreticulin 3 0.03 Orthogroups_2024-Update
Glyma.12G050700 No alias calreticulin 3 0.03 Orthogroups_2024-Update
Glyma.20G098400 No alias calreticulin 1b 0.04 Orthogroups_2024-Update
Potri.017G026300 No alias calreticulin 3 0.02 Orthogroups_2024-Update
Seita.3G185800.1 No alias ER luminal lectin chaperone *(CRT) & component *(CRT3)... 0.03 Orthogroups_2024-Update
Seita.J030900.1 No alias ER luminal lectin chaperone *(CRT) 0.02 Orthogroups_2024-Update
Sobic.001G025500.1 No alias ER luminal lectin chaperone *(CRT) 0.03 Orthogroups_2024-Update
Sobic.009G190500.1 No alias ER luminal lectin chaperone *(CRT) & component *(CRT3)... 0.02 Orthogroups_2024-Update
Solyc01g100380 No alias Calreticulin (AHRD V3.3 *** CALR_NICPL) 0.03 Orthogroups_2024-Update
Sopen01g043900 No alias Calreticulin family 0.03 Orthogroups_2024-Update
Sopen05g034620 No alias Calreticulin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0005783 endoplasmic reticulum IEA InterProScan predictions
BP GO:0006457 protein folding IEA InterProScan predictions
MF GO:0051082 unfolded protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001580 Calret/calnex 26 262
IPR001580 Calret/calnex 264 337
No external refs found!