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  5. Kfl00098_0060

Kfl00098_0060 (kfl00098_0060_v1.1)


Aliases : kfl00098_0060_v1.1

Description : (q40070|psbr_horvu : 102.0) Photosystem II 10 kDa polypeptide, chloroplast precursor - Hordeum vulgare (Barley) & (at1g79040 : 84.7) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 169.4) & (original description: no original description)


Gene families : OG_42_0002845 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00098_0060
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_20557 No alias photosystem ii 10 kda polypeptide, chloroplastic 0.04 Orthogroups_2024-Update
Brara.G02097.1 No alias component *(PsbR) of PS-II complex 0.03 Orthogroups_2024-Update
Brara.G03632.1 No alias component *(PsbR) of PS-II complex 0.04 Orthogroups_2024-Update
Cre06.g261000 No alias photosystem II subunit R 0.06 Orthogroups_2024-Update
Glyma.08G173700 No alias photosystem II subunit R 0.02 Orthogroups_2024-Update
Glyma.15G253700 No alias photosystem II subunit R 0.05 Orthogroups_2024-Update
MA_282g0010 No alias (p06183|psbr_soltu : 160.0) Photosystem II 10 kDa... 0.03 Orthogroups_2024-Update
Mp3g05840.1 No alias component PsbR of PS-II complex 0.04 Orthogroups_2024-Update
Potri.001G438700 No alias photosystem II subunit R 0.02 Orthogroups_2024-Update
Pp1s15_409V6 No alias photosystem ii 10 kda polypeptide 0.03 Orthogroups_2024-Update
Pp1s41_264V6 No alias photosystem ii 10 kda polypeptide 0.02 Orthogroups_2024-Update
Pp1s54_166V6 No alias photosystem ii 10 kda polypeptide 0.02 Orthogroups_2024-Update
Pp1s54_167V6 No alias photosystem ii 10 kda polypeptide 0.05 Orthogroups_2024-Update
Seita.6G032200.1 No alias component *(PsbR) of PS-II complex 0.04 Orthogroups_2024-Update
Sobic.007G071500.1 No alias component *(PsbR) of PS-II complex 0.02 Orthogroups_2024-Update
Solyc07g066310 No alias Photosystem II 10 kDa polypeptide family protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0042651 thylakoid membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 47 140
No external refs found!