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  5. Kfl00121_0090

Kfl00121_0090 (kfl00121_0090_v1.1)


Aliases : kfl00121_0090_v1.1

Description : (q9fns4|mbb1_chlre : 139.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (at3g17040 : 134.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (reliability: 268.0) & (original description: no original description)


Gene families : OG_42_0005803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005803_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00121_0090
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g19560 No alias tetratricopeptide repeat domain containing protein, expressed 0.01 Orthogroups_2024-Update
evm.model.contig_2662.1 No alias (at3g17040 : 88.6) It is a RNA tetratricopeptide... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019734 TPR_repeat 484 514
No external refs found!