Aliases : kfl00124_0110_v1.1
Description : (q43064|pyrb3_pea : 479.0) Aspartate carbamoyltransferase 3, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 3) (ATCase 3) - Pisum sativum (Garden pea) & (at3g20330 : 477.0) encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis; PYRIMIDINE B (PYRB); FUNCTIONS IN: amino acid binding, protein binding, aspartate carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate carbamoyltransferase, eukaryotic (InterPro:IPR002082), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131); BEST Arabidopsis thaliana protein match is: ornithine carbamoyltransferase (TAIR:AT1G75330.1); Has 16843 Blast hits to 16841 proteins in 2894 species: Archae - 534; Bacteria - 10902; Metazoa - 218; Fungi - 284; Plants - 116; Viruses - 6; Other Eukaryotes - 4783 (source: NCBI BLink). & (reliability: 954.0) & (original description: no original description)
Gene families : OG_42_0005252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005252_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00124_0110 | |
Cluster | HCCA clusters: Cluster_55 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os08g15030 | No alias | aspartate carbamoyltransferase, putative, expressed | 0.01 | Orthogroups_2024-Update | |
Potri.001G357200 | No alias | PYRIMIDINE B | 0.03 | Orthogroups_2024-Update | |
Solyc11g006350 | No alias | aspatate carbamoyltransferase | 0.03 | Orthogroups_2024-Update | |
Sopen11g002250 | No alias | Aspartate/ornithine carbamoyltransferase, carbamoyl-P... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006520 | cellular amino acid metabolic process | IEA | InterProScan predictions |
MF | GO:0016597 | amino acid binding | IEA | InterProScan predictions |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
BP | GO:0010959 | regulation of metal ion transport | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
CC | GO:0030176 | integral component of endoplasmic reticulum membrane | IEP | Predicted GO |
CC | GO:0031227 | intrinsic component of endoplasmic reticulum membrane | IEP | Predicted GO |
BP | GO:0032879 | regulation of localization | IEP | Predicted GO |
MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0043269 | regulation of ion transport | IEP | Predicted GO |
BP | GO:0051049 | regulation of transport | IEP | Predicted GO |
BP | GO:0051924 | regulation of calcium ion transport | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
BP | GO:2001256 | regulation of store-operated calcium entry | IEP | Predicted GO |
No external refs found! |