Kfl00215_0170 (kfl00215_0170_v1.1)

Aliases : kfl00215_0170_v1.1

Description : (p04690|tbb_chlre : 825.0) Tubulin beta-1/beta-2 chain - Chlamydomonas reinhardtii & (at5g62700 : 812.0) encodes tubulin beta-2/beta-3 chain; tubulin beta chain 3 (TUB3); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to cold; LOCATED IN: tubulin complex, cell wall; EXPRESSED IN: cultured cell, seed; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 2 (TAIR:AT5G62690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1624.0) & (original description: no original description)

Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Klebsormidium release: Kfl00215_0170
Cluster	HCCA clusters: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
13250	No alias	tubulin beta chain 2	0.01	Orthogroups_2024-Update
186992	No alias	tubulin beta 8	0.03	Orthogroups_2024-Update
23468	No alias	tubulin beta 8	0.02	Orthogroups_2024-Update
408201	No alias	tubulin beta 8	0.02	Orthogroups_2024-Update
Bradi2g21340	No alias	beta-6 tubulin	0.02	Orthogroups_2024-Update
Brara.A02439.1	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer	0.03	Orthogroups_2024-Update
Brara.D01772.1	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer	0.05	Orthogroups_2024-Update
Brara.E01346.1	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer	0.03	Orthogroups_2024-Update
Brara.F01940.1	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer	0.05	Orthogroups_2024-Update
Brara.F02611.1	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer	0.02	Orthogroups_2024-Update
Cre12.g542250	No alias	tubulin beta chain 2	0.02	Orthogroups_2024-Update
Glyma.20G159200	No alias	tubulin beta 8	0.08	Orthogroups_2024-Update
HORVU0Hr1G026030.2	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer	0.02	Orthogroups_2024-Update
MA_219029g0010	No alias	(at5g23860 : 422.0) beta-tubulin, preferentially...	0.02	Orthogroups_2024-Update
Mp1g20730.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	Orthogroups_2024-Update
Mp2g09390.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	Orthogroups_2024-Update
Mp2g16780.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	Orthogroups_2024-Update
PSME_00001574-RA	No alias	(q76fs3\|tbb6_orysa : 424.0) Tubulin beta-6 chain (Beta-6...	0.01	Orthogroups_2024-Update
PSME_00017671-RA	No alias	(p93176\|tbb_horvu : 390.0) Tubulin beta chain (Beta...	0.02	Orthogroups_2024-Update
Potri.003G126800	No alias	beta-6 tubulin	0.02	Orthogroups_2024-Update
Solyc06g076640	No alias	Tubulin beta chain (AHRD V3.3 *** M1CZM0_SOLTU)	0.02	Orthogroups_2024-Update
Solyc10g085020	No alias	Tubulin beta chain (AHRD V3.3 *** M1ARQ6_SOLTU)	0.03	Orthogroups_2024-Update
Solyc12g089310	No alias	Tubulin beta chain (AHRD V3.3 *** A0A0V0ICK0_SOLCH)	0.02	Orthogroups_2024-Update
Sopen10g031450	No alias	Tubulin/FtsZ family, GTPase domain	0.02	Orthogroups_2024-Update
evm.model.contig_2073.5	No alias	(p37832\|tbb7_orysa : 682.0) Tubulin beta-7 chain (Beta-7...	0.05	Orthogroups_2024-Update
evm.model.tig00001067.6	No alias	(p04690\|tbb_chlre : 752.0) Tubulin beta-1/beta-2 chain -...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
CC	GO:0000776	kinetochore	IEP	Predicted GO
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0003777	microtubule motor activity	IEP	Predicted GO
MF	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005667	transcription factor complex	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
BP	GO:0006839	mitochondrial transport	IEP	Predicted GO
BP	GO:0006848	pyruvate transport	IEP	Predicted GO
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Predicted GO
BP	GO:0006928	movement of cell or subcellular component	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0007018	microtubule-based movement	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015718	monocarboxylic acid transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
CC	GO:0031262	Ndc80 complex	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043248	proteasome assembly	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
MF	GO:0061505	DNA topoisomerase II activity	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
BP	GO:0098656	anion transmembrane transport	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
BP	GO:1901475	pyruvate transmembrane transport	IEP	Predicted GO
BP	GO:1903825	organic acid transmembrane transport	IEP	Predicted GO
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predicted GO
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	261	382
IPR003008	Tubulin_FtsZ_GTPase	3	211

External Links

No external refs found!

Kfl00215_0170 (kfl00215_0170_v1.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation