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  5. Solyc06g071690

Solyc06g071690


Description : R2R3MYB transcription factor 50


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g071690
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
A4A49_19591 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.03 Orthogroups_2024-Update
AC206901.3_FG005 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
At3g01140 No alias Myb domain protein 106 [Source:UniProtKB/TrEMBL;Acc:F4J2A8] 0.03 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.03 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01071.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03816.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Glyma.06G160500 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.10G180800 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.13G247200 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.14G214500 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
LOC_Os02g49986 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G094200 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Potri.005G224100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Seita.4G221900.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!