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- Kfl00386_0020
Kfl00386_0020 (kfl00386_0020_v1.1)
Aliases : kfl00386_0020_v1.1
Description : (at1g55350 : 583.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (reliability: 1166.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Klebsormidium release: Kfl00386_0020 | |
| Cluster | HCCA clusters: Cluster_83 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| 235391 | No alias | calpain-type cysteine protease family | 0.01 | Orthogroups_2024-Update | |
| 236021 | No alias | calpain-type cysteine protease family | 0.03 | Orthogroups_2024-Update | |
| At1g55350 | No alias | Calpain-type cysteine protease family... | 0.02 | Orthogroups_2024-Update | |
| Bradi3g53020 | No alias | calpain-type cysteine protease family | 0.03 | Orthogroups_2024-Update | |
| Glyma.05G167200 | No alias | calpain-type cysteine protease family | 0.02 | Orthogroups_2024-Update | |
| Glyma.08G125500 | No alias | calpain-type cysteine protease family | 0.04 | Orthogroups_2024-Update | |
| MA_129368g0010 | No alias | (at1g55350 : 1456.0) Similar to maize DEK1, a gene... | 0.06 | Orthogroups_2024-Update | |
| Mp2g12820.1 | No alias | calcium-activated protease (Phytocalpain) | 0.02 | Orthogroups_2024-Update | |
| PSME_00003676-RA | No alias | (at1g55350 : 2481.0) Similar to maize DEK1, a gene... | 0.01 | Orthogroups_2024-Update | |
| Seita.9G434900.1 | No alias | C2-class (Phytocalpain) calcium-activated protease | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G400500.1 | No alias | C2-class (Phytocalpain) calcium-activated protease | 0.03 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0004175 | endopeptidase activity | None | Extended |
| MF | GO:0004197 | cysteine-type endopeptidase activity | None | Extended |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEA | InterProScan predictions |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
| BP | GO:0006508 | proteolysis | IEA | InterProScan predictions |
| BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| MF | GO:0008233 | peptidase activity | None | Extended |
| MF | GO:0008234 | cysteine-type peptidase activity | None | Extended |
| MF | GO:0016787 | hydrolase activity | None | Extended |
| BP | GO:0019538 | protein metabolic process | None | Extended |
| BP | GO:0043170 | macromolecule metabolic process | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| CC | GO:0044464 | cell part | None | Extended |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| MF | GO:0140096 | catalytic activity, acting on a protein | None | Extended |
| BP | GO:1901564 | organonitrogen compound metabolic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Predicted GO |
| BP | GO:0006101 | citrate metabolic process | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
| BP | GO:0006528 | asparagine metabolic process | IEP | Predicted GO |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Predicted GO |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Predicted GO |
| BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Predicted GO |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
| CC | GO:0031011 | Ino80 complex | IEP | Predicted GO |
| CC | GO:0033202 | DNA helicase complex | IEP | Predicted GO |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0043543 | protein acylation | IEP | Predicted GO |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predicted GO |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
| CC | GO:0097346 | INO80-type complex | IEP | Predicted GO |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| CC | GO:1904949 | ATPase complex | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR022682 | Calpain_domain_III | 2200 | 2336 |
| IPR001300 | Peptidase_C2_calpain_cat | 1877 | 2188 |
