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  5. Kfl00410_0060

Kfl00410_0060 (kfl00410_0060_v1.1)


Aliases : kfl00410_0060_v1.1

Description : (at1g76010 : 190.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (reliability: 380.0) & (original description: no original description)


Gene families : OG_42_0000903 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00410_0060
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G011020.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g06980 No alias nucleic acid binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s10_152V6 No alias ribonuclease p 0.02 Orthogroups_2024-Update
Seita.9G528100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc09g091590 No alias Alba DNA/RNA-binding protein (AHRD V3.3 *-* AT3G07030.5) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003724 RNA helicase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004004 ATP-dependent RNA helicase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008186 RNA-dependent ATPase activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 19 83
No external refs found!