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  5. Kfl00570_0030

Kfl00570_0030 (kfl00570_0030_v1.1)


Aliases : kfl00570_0030_v1.1

Description : (at3g33520 : 375.0) Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature.; actin-related protein 6 (ARP6); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 12358 Blast hits to 12072 proteins in 2463 species: Archae - 0; Bacteria - 4; Metazoa - 5326; Fungi - 3155; Plants - 1501; Viruses - 2; Other Eukaryotes - 2370 (source: NCBI BLink). & (p20904|act_volca : 155.0) Actin - Volvox carteri & (reliability: 750.0) & (original description: no original description)


Gene families : OG_42_0006622 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006622_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00570_0030
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Pp1s62_87V6 No alias actin-related protein 6 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 30 491
No external refs found!