Aliases : kfl00764_0020_v1.1, kfl00764_0020_v1.1
Description : (p46287|rl11_medsa : 322.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (at5g45775 : 321.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (reliability: 642.0) & (original description: no original description)
Gene families : OG_42_0001107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001107_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00764_0020 | |
Cluster | HCCA clusters: Cluster_47 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_37402 | No alias | 60s ribosomal protein l11-2 | 0.02 | Orthogroups_2024-Update | |
A4A49_61288 | No alias | 60s ribosomal protein l11-2 | 0.03 | Orthogroups_2024-Update | |
At3g58700 | No alias | 60S ribosomal protein L11-2... | 0.03 | Orthogroups_2024-Update | |
At4g18730 | No alias | 60S ribosomal protein L11-2... | 0.02 | Orthogroups_2024-Update | |
Bradi2g06467 | No alias | ribosomal protein large subunit 16A | 0.03 | Orthogroups_2024-Update | |
Bradi2g32640 | No alias | ribosomal protein large subunit 16A | 0.04 | Orthogroups_2024-Update | |
Bradi3g09030 | No alias | ribosomal protein large subunit 16A | 0.03 | Orthogroups_2024-Update | |
Brara.A00981.1 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Brara.K00428.1 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Cre01.g027000 | No alias | ribosomal protein large subunit 16A | 0.02 | Orthogroups_2024-Update | |
Glyma.04G111500 | No alias | Ribosomal L5P family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.06G272500 | No alias | Ribosomal L5P family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.06G323000 | No alias | Ribosomal L5P family protein | 0.01 | Orthogroups_2024-Update | |
Glyma.12G131700 | No alias | Ribosomal L5P family protein | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G028820.1 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g10820 | No alias | ribosomal protein L5, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_74060g0010 | No alias | (at5g45775 : 344.0) Ribosomal L5P family protein;... | 0.02 | Orthogroups_2024-Update | |
Mp2g24740.1 | No alias | component RPL11 of LSU proteome component | 0.04 | Orthogroups_2024-Update | |
Pp1s239_32V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s265_52V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s38_269V6 | No alias | 60s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Pp1s41_304V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s54_157V6 | No alias | 60s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
Seita.5G144900.1 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.01 | Orthogroups_2024-Update | |
Seita.7G232800.1 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Sobic.003G025200.2 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.004G103800.1 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Sobic.004G104100.1 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Sobic.004G104300.1 | No alias | component *(uL5) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Solyc02g086240 | No alias | Ribosomal L5P family protein (AHRD V3.3 *** AT5G45775.2) | 0.02 | Orthogroups_2024-Update | |
Solyc07g055230 | No alias | homeodomain GLABROUS 7 (AHRD V3.3 --* AT5G52170.3) | 0.03 | Orthogroups_2024-Update | |
Solyc10g007980 | No alias | Ribosomal L5P family protein (AHRD V3.3 *** AT5G45775.2) | 0.03 | Orthogroups_2024-Update | |
Solyc12g010930 | No alias | Ribosomal L5P family protein (AHRD V3.3 *** AT5G45775.2) | 0.04 | Orthogroups_2024-Update | |
Sopen02g030920 | No alias | ribosomal L5P family C-terminus | 0.04 | Orthogroups_2024-Update | |
Sopen07g026990 | No alias | ribosomal L5P family C-terminus | 0.02 | Orthogroups_2024-Update | |
Sopen10g003850 | No alias | ribosomal L5P family C-terminus | 0.03 | Orthogroups_2024-Update | |
Sopen12g006290 | No alias | ribosomal L5P family C-terminus | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_4456.22 | No alias | (p46287|rl11_medsa : 230.0) 60S ribosomal protein L11... | 0.04 | Orthogroups_2024-Update | |
evm.model.tig00020610.38 | No alias | (at2g42740 : 221.0) encodes a cytosolic ribosomal... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0003688 | DNA replication origin binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006534 | cysteine metabolic process | IEP | Predicted GO |
BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Predicted GO |
BP | GO:0006563 | L-serine metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Predicted GO |
MF | GO:0008193 | tRNA guanylyltransferase activity | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
BP | GO:0010639 | negative regulation of organelle organization | IEP | Predicted GO |
BP | GO:0010824 | regulation of centrosome duplication | IEP | Predicted GO |
BP | GO:0010826 | negative regulation of centrosome duplication | IEP | Predicted GO |
BP | GO:0010948 | negative regulation of cell cycle process | IEP | Predicted GO |
BP | GO:0016073 | snRNA metabolic process | IEP | Predicted GO |
BP | GO:0016180 | snRNA processing | IEP | Predicted GO |
MF | GO:0016412 | serine O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0016413 | O-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
BP | GO:0019344 | cysteine biosynthetic process | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
CC | GO:0019866 | organelle inner membrane | IEP | Predicted GO |
BP | GO:0030030 | cell projection organization | IEP | Predicted GO |
BP | GO:0030031 | cell projection assembly | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
BP | GO:0032886 | regulation of microtubule-based process | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034472 | snRNA 3'-end processing | IEP | Predicted GO |
BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
CC | GO:0036038 | MKS complex | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0043628 | ncRNA 3'-end processing | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044441 | ciliary part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044463 | cell projection part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0044782 | cilium organization | IEP | Predicted GO |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
BP | GO:0046605 | regulation of centrosome cycle | IEP | Predicted GO |
BP | GO:0046606 | negative regulation of centrosome cycle | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
BP | GO:0051129 | negative regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Predicted GO |
BP | GO:0051494 | negative regulation of cytoskeleton organization | IEP | Predicted GO |
BP | GO:0060271 | cilium assembly | IEP | Predicted GO |
CC | GO:0070469 | respiratory chain | IEP | Predicted GO |
BP | GO:0070507 | regulation of microtubule cytoskeleton organization | IEP | Predicted GO |
MF | GO:0070568 | guanylyltransferase activity | IEP | Predicted GO |
BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
BP | GO:0120031 | plasma membrane bounded cell projection assembly | IEP | Predicted GO |
BP | GO:0120036 | plasma membrane bounded cell projection organization | IEP | Predicted GO |
CC | GO:0120038 | plasma membrane bounded cell projection part | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No external refs found! |