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  5. Kfl00885_0040

Kfl00885_0040 (kfl00885_0040_v1.1)


Aliases : kfl00885_0040_v1.1

Description : (at1g18260 : 116.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description)


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00885_0040
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Pp1s201_29V6 No alias F14J22.1; U-box domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc01g007030 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g068920 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0007021 tubulin complex assembly IEP Predicted GO
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0048487 beta-tubulin binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006597 Sel1-like 654 688
IPR006597 Sel1-like 329 363
IPR006597 Sel1-like 437 472
IPR006597 Sel1-like 366 399
IPR006597 Sel1-like 581 615
IPR006597 Sel1-like 545 580
IPR006597 Sel1-like 509 543
IPR006597 Sel1-like 473 507
IPR006597 Sel1-like 726 761
IPR006597 Sel1-like 319 327
IPR006597 Sel1-like 690 724
IPR006597 Sel1-like 401 435
IPR006597 Sel1-like 617 651
No external refs found!