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  5. Solyc07g005590

Solyc07g005590


Description : Cyclic nucleotide-gated ion channel, putative (AHRD V3.3 *** B9STR6_RICCO)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g005590
Cluster HCCA clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G271200 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
LOC_Os02g54760 No alias cyclic nucleotide-gated ion channel 14, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 109 433
IPR000595 cNMP-bd_dom 531 617
No external refs found!