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  5. LOC_Os01g05010

LOC_Os01g05010


Description : mitochondrial glycoprotein, putative, expressed


Gene families : OG_42_0001442 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g05010
Cluster HCCA clusters: cluster_0043

Target Alias Description ECC score Gene Family Method Actions
At5g02050 No alias At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6] 0.04 Orthogroups_2024-Update
At5g05990 No alias AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87] 0.03 Orthogroups_2024-Update
Bradi2g02890 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Brara.J02613.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Cre04.g225600 No alias Mitochondrial glycoprotein family protein 0.01 Orthogroups_2024-Update
GRMZM2G011213 No alias Mitochondrial glycoprotein family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G011560.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G046980.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g05060 No alias mitochondrial glycoprotein, putative, expressed 0.02 Orthogroups_2024-Update
MA_5294g0010 No alias (at5g02050 : 147.0) Mitochondrial glycoprotein family... 0.03 Orthogroups_2024-Update
PSME_00000622-RA No alias (at5g02050 : 166.0) Mitochondrial glycoprotein family... 0.03 Orthogroups_2024-Update
PSME_00002240-RA No alias (at5g02050 : 153.0) Mitochondrial glycoprotein family... 0.03 Orthogroups_2024-Update
Potri.006G090700 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Potri.010G198600 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Pp1s118_113V6 No alias contains ESTs AU108164(C53469),C27934(C53469) similar to... 0.02 Orthogroups_2024-Update
Seita.4G141500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G099100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G075100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G075200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G134100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0006760GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003428 MAM33 72 262
No external refs found!