1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g007030

Solyc07g007030


Description : Transmembrane 9 superfamily member (AHRD V3.3 *** A0A0V0IRK7_SOLCH)


Gene families : OG_42_0000405 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000405_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g007030
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
165859 No alias transmembrane nine 7 0.02 Orthogroups_2024-Update
A4A49_30292 No alias transmembrane 9 superfamily member 11 0.05 Orthogroups_2024-Update
A4A49_32780 No alias transmembrane 9 superfamily member 9 0.03 Orthogroups_2024-Update
Bradi3g19620 No alias Endomembrane protein 70 protein family 0.05 Orthogroups_2024-Update
Bradi4g37690 No alias Endomembrane protein 70 protein family 0.02 Orthogroups_2024-Update
Brara.D00756.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I04498.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre10.g439850 No alias transmembrane nine 7 0.01 Orthogroups_2024-Update
Cre12.g494350 No alias Endomembrane protein 70 protein family 0.01 Orthogroups_2024-Update
GRMZM2G180575 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Glyma.14G003500 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Potri.006G264500 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Pp1s24_182V6 No alias endosomal p24a protein 0.02 Orthogroups_2024-Update
Pp1s6_147V6 No alias endosomal p24a protein 0.06 Orthogroups_2024-Update
Seita.4G196200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G331900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen07g003100 No alias Endomembrane protein 70 0.08 Orthogroups_2024-Update
Sopen07g029410 No alias Endomembrane protein 70 0.03 Orthogroups_2024-Update
Sopen12g005400 No alias Endomembrane protein 70 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004240 EMP70 55 609
No external refs found!