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  5. Solyc01g079590

Solyc01g079590


Description : Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 *** AT3G62580.1)


Gene families : OG_42_0003462 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003462_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc01g079590
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi1g60391 No alias Late embryogenesis abundant protein (LEA) family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G104350.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.002G197800 No alias Late embryogenesis abundant protein (LEA) family protein 0.03 Orthogroups_2024-Update
Pp1s192_12V6 No alias af411796_1at3g62580 t12c14_280 0.02 Orthogroups_2024-Update
Sopen01g031370 No alias Domain of unknown function (DUF4149) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015171 amino acid transmembrane transporter activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025423 DUF4149 47 148
No external refs found!