LOC_Os01g10490

Description : keratin, type I cytoskeletal 9, putative, expressed

Gene families : OG_42_0002810 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002810_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g10490
Cluster	HCCA clusters: cluster_0031

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g38120	No alias	protodermal factor 1	0.02	Orthogroups_2024-Update
Potri.002G060800	No alias	protodermal factor 1	0.02	Orthogroups_2024-Update
Potri.005G200900	No alias	protodermal factor 1	0.03	Orthogroups_2024-Update
Solyc12g011010	No alias	protodermal factor 1 (AHRD V3.3 - AT2G42840.1)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0004832	valine-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO

No InterPro domains available for this sequence

External Links

No external refs found!