LOC_Os01g15900


Description : expressed protein


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g15900
Cluster HCCA clusters: cluster_0052

Target Alias Description ECC score Gene Family Method Actions
At1g26790 No alias Dof-type zinc finger DNA-binding family protein... 0.02 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.04 Orthogroups_2024-Update
At3g21270 No alias DOF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VA07] 0.02 Orthogroups_2024-Update
At5g39660 No alias Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] 0.04 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.02 Orthogroups_2024-Update
Bradi1g03710 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Brara.C04204.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.F02426.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.G02891.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.I00088.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.I00633.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
GRMZM2G089949 No alias cycling DOF factor 2 0.07 Orthogroups_2024-Update
Glyma.09G237000 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.13G062500 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G044560.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU2Hr1G119160.3 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
LOC_Os01g55340 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g20790.1 No alias transcription factor (DOF) 0.01 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.002G174300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.003G034200 No alias DOF zinc finger protein 1 0.03 Orthogroups_2024-Update
Potri.007G036400 No alias OBF binding protein 1 0.03 Orthogroups_2024-Update
Potri.008G087800 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Potri.011G047500 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Pp1s169_171V6 No alias cycling dof factor 2 0.02 Orthogroups_2024-Update
Pp1s267_24V6 No alias cycling dof factor 2 0.01 Orthogroups_2024-Update
Pp1s351_46V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s37_7V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s69_113V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Sobic.001G252800.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Sobic.003G121400.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.03 Orthogroups_2024-Update
Solyc02g078620 No alias Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA) 0.02 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.03 Orthogroups_2024-Update
Solyc03g115940 No alias Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA) 0.02 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.04 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.02 Orthogroups_2024-Update
Sopen02g015430 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen02g022800 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 166 222
No external refs found!