1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g40340

LOC_Os01g40340


Description : SIT4 phosphatase-associated protein domain containing protein, expressed


Gene families : OG_42_0001193 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001193_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g40340
Cluster HCCA clusters: cluster_0142

Target Alias Description ECC score Gene Family Method Actions
Bradi2g42070 No alias SIT4 phosphatase-associated family protein 0.03 Orthogroups_2024-Update
Brara.I02811.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G023200 No alias SIT4 phosphatase-associated family protein 0.02 Orthogroups_2024-Update
Glyma.11G145600 No alias SIT4 phosphatase-associated family protein 0.04 Orthogroups_2024-Update
Glyma.12G076100 No alias SIT4 phosphatase-associated family protein 0.03 Orthogroups_2024-Update
Glyma.12G174000 No alias SIT4 phosphatase-associated family protein 0.02 Orthogroups_2024-Update
Glyma.13G325400 No alias SIT4 phosphatase-associated family protein 0.03 Orthogroups_2024-Update
Kfl00075_0170 kfl00075_0170_v1.... (at2g28360 : 497.0) SIT4 phosphatase-associated family... 0.02 Orthogroups_2024-Update
Mp1g18680.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.009G014700 No alias SIT4 phosphatase-associated family protein 0.03 Orthogroups_2024-Update
Pp1s112_229V6 No alias unnamed protein product [Vitis vinifera] 0.01 Orthogroups_2024-Update
Pp1s35_153V6 No alias PREDICTED: hypothetical protein [Vitis vinifera] 0.02 Orthogroups_2024-Update
Seita.3G122200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.5G256000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G200200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G255700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen06g031570 No alias SIT4 phosphatase-associated protein 0.03 Orthogroups_2024-Update
evm.model.tig00001049.12 No alias (at1g30470 : 127.0) SIT4 phosphatase-associated family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR007587 SAPS 253 386
IPR007587 SAPS 28 252
No external refs found!