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  5. LOC_Os01g41900

LOC_Os01g41900


Description : Myb transcription factor, putative, expressed


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g41900
Cluster HCCA clusters: cluster_0004

Target Alias Description ECC score Gene Family Method Actions
130556 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
439294 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
A4A49_28262 No alias transcription factor myb1r1 0.03 Orthogroups_2024-Update
At1g19000 No alias AT1G19000 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMC7] 0.04 Orthogroups_2024-Update
At1g70000 No alias At1g70000 [Source:UniProtKB/TrEMBL;Acc:O04544] 0.02 Orthogroups_2024-Update
At3g10580 No alias Homeodomain-like superfamily protein... 0.02 Orthogroups_2024-Update
At3g11280 No alias Duplicated homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
At5g23650 No alias Homeodomain-like transcriptional regulator... 0.03 Orthogroups_2024-Update
Bradi2g42870 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi3g33400 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.E02946.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.F00380.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.G02453.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.H02392.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
GRMZM2G049695 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.01G003000 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.01G038600 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.03G078000 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G177300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G074500 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G293300 No alias myb-like transcription factor family protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G019480.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
MA_17466g0010 No alias (at5g47390 : 219.0) myb-like transcription factor family... 0.02 Orthogroups_2024-Update
MA_867875g0010 No alias (at5g47390 : 157.0) myb-like transcription factor family... 0.03 Orthogroups_2024-Update
Mp2g13020.1 No alias transcription factor (MYB-related) 0.03 Orthogroups_2024-Update
Potri.016G112300 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G319600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Seita.9G321800.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.001G295600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.05 Orthogroups_2024-Update
Sobic.001G297500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Sobic.003G211200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.007G037100.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Solyc06g071230 No alias MYB transcription factor (AHRD V3.3 *** A1DR86_CATRO) 0.03 Orthogroups_2024-Update
Sopen06g027540 No alias Myb-like DNA-binding domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 134 177
No external refs found!