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  5. LOC_Os01g47780

LOC_Os01g47780


Description : fasciclin domain containing protein, expressed


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g47780
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
55113 No alias FASCICLIN-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
A4A49_07465 No alias fasciclin-like arabinogalactan protein 11 0.02 Orthogroups_2024-Update
A4A49_07466 No alias fasciclin-like arabinogalactan protein 11 0.02 Orthogroups_2024-Update
A4A49_28632 No alias fasciclin-like arabinogalactan protein 12 0.04 Orthogroups_2024-Update
At1g03870 No alias At1g03870 [Source:UniProtKB/TrEMBL;Acc:B3LF88] 0.04 Orthogroups_2024-Update
Bradi2g00220 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Bradi2g16560 No alias FASCICLIN-like arabinogalactan protein 13 precursor 0.07 Orthogroups_2024-Update
Bradi2g16570 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
Bradi2g34650 No alias FASCICLIN-like arabinogalactan-protein 11 0.05 Orthogroups_2024-Update
Brara.B00081.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
GRMZM2G022931 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Glyma.11G147800 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Glyma.11G148700 No alias FASCICLIN-like arabinogalactan-protein 12 0.03 Orthogroups_2024-Update
Glyma.19G180700 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
LOC_Os02g20560 No alias fasciclin domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g07060 No alias fasciclin domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g48900 No alias fasciclin domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_5195g0010 No alias (at5g60490 : 91.7) FASCICLIN-like... 0.04 Orthogroups_2024-Update
Potri.006G129200 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Potri.013G120600 No alias FASCICLIN-like arabinogalactan 6 0.06 Orthogroups_2024-Update
Potri.013G151500 No alias FASCICLIN-like arabinogalactan-protein 12 0.02 Orthogroups_2024-Update
Potri.015G013300 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Potri.019G093300 No alias FASCICLIN-like arabinogalactan 6 0.04 Orthogroups_2024-Update
Seita.3G146700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G146800.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Seita.5G263600.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc06g075220 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g053530 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc09g007660 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen06g031630 No alias Fasciclin domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 47 183
No external refs found!