LOC_Os01g48130

Description : no apical meristem protein, putative, expressed

Gene families : OG_42_0000500 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000500_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g48130
Cluster	HCCA clusters: cluster_0058

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g05700	No alias	NAC domain containing protein 75	0.03	Orthogroups_2024-Update
Bradi2g33307	No alias	NAC domain containing protein 75	0.03	Orthogroups_2024-Update
Brara.I02940.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.05G002700	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.10G204700	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Glyma.12G206900	No alias	NAC domain containing protein 73	0.02	Orthogroups_2024-Update
HORVU6Hr1G038560.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os05g10620	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
Potri.011G058400	No alias	NAC domain containing protein 73	0.03	Orthogroups_2024-Update
Solyc05g009840	No alias	NAC domain-containing protein (AHRD V3.3 *** A0A060A661_BOENI)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
MF	GO:0008430	selenium binding	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predicted GO
BP	GO:0044093	positive regulation of molecular function	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	70	209

External Links

No external refs found!

LOC_Os01g48130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation