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  5. LOC_Os01g48370

LOC_Os01g48370


Description : OsFBT1 - F-box and tubby domain containing protein, expressed


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g48370
Cluster HCCA clusters: cluster_0131

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62390 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
Bradi5g27110 No alias tubby like protein 1 0.03 Orthogroups_2024-Update
PSME_00035615-RA No alias (at2g47900 : 306.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
PSME_00050335-RA No alias (at2g47900 : 325.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
Potri.005G228500 No alias tubby like protein 6 0.02 Orthogroups_2024-Update
Potri.007G023432 No alias tubby like protein 2 0.02 Orthogroups_2024-Update
Sobic.001G372000.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc04g071750 No alias Tubby-like F-box protein (AHRD V3.3 *** K4BTG5_SOLLC) 0.02 Orthogroups_2024-Update
Sopen09g029350 No alias Tub family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 98 351
No external refs found!