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  5. Solyc01g079950

Solyc01g079950


Description : Xyloglucan-specific endoglucanase inhibitor protein 2 (AHRD V3.3 *** F1DHN5_SOLTU)


Gene families : OG_42_0000468 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g079950
Cluster HCCA clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G210100 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
MA_96623g0010 No alias (at1g03230 : 263.0) Eukaryotic aspartyl protease family... 0.03 Orthogroups_2024-Update
Solyc09g065000 No alias Eukaryotic aspartyl protease family protein, putative... 0.04 Orthogroups_2024-Update
Sopen01g042310 No alias Xylanase inhibitor C-terminal 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 262 423
IPR032861 TAXi_N 53 228
No external refs found!