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  5. LOC_Os01g56730

LOC_Os01g56730


Description : expressed protein


Gene families : OG_42_0000205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g56730
Cluster HCCA clusters: cluster_0140

Target Alias Description ECC score Gene Family Method Actions
Bradi1g74250 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G075590.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g10140 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os06g10290 No alias OsFBX191 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g10300 No alias OsFBL29 - F-box domain and LRR containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.1G042200.1 No alias elicitor peptide precursor *(proPEP)) 0.02 Orthogroups_2024-Update
Sobic.007G017800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006566 FBD 220 254
No external refs found!