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  5. LOC_Os01g56780

LOC_Os01g56780


Description : plus-3 domain containing protein, expressed


Gene families : OG_42_0007288 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g56780
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
Bradi2g51500 No alias zinc knuckle (CCHC-type) family protein 0.05 Orthogroups_2024-Update
Brara.F03796.1 No alias circadian clock repression factor *(TZP) 0.03 Orthogroups_2024-Update
Glyma.01G234600 No alias zinc knuckle (CCHC-type) family protein 0.03 Orthogroups_2024-Update
Glyma.10G185100 No alias zinc knuckle (CCHC-type) family protein 0.04 Orthogroups_2024-Update
Glyma.11G008300 No alias zinc knuckle (CCHC-type) family protein 0.04 Orthogroups_2024-Update
Glyma.20G205301 No alias Function unknown 0.04 Orthogroups_2024-Update
HORVU3Hr1G075820.2 No alias circadian clock repression factor *(TZP) 0.05 Orthogroups_2024-Update
HORVU3Hr1G075830.1 No alias circadian clock repression factor *(TZP) 0.07 Orthogroups_2024-Update
Potri.008G162100 No alias zinc knuckle (CCHC-type) family protein 0.05 Orthogroups_2024-Update
Potri.010G076700 No alias zinc knuckle (CCHC-type) family protein 0.03 Orthogroups_2024-Update
Seita.5G337100.1 No alias circadian clock repression factor *(TZP) 0.07 Orthogroups_2024-Update
Sobic.003G313300.1 No alias circadian clock repression factor *(TZP) 0.05 Orthogroups_2024-Update
Solyc09g083390 No alias zinc knuckle (CCHC-type) family protein (AHRD V3.3 *-*... 0.07 Orthogroups_2024-Update
Sopen09g032310 No alias Plus-3 domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004343 Plus-3_dom 779 868
No external refs found!