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  5. LOC_Os01g59990

LOC_Os01g59990


Description : ribosomal protein L24, putative, expressed


Gene families : OG_42_0002119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g59990
Cluster HCCA clusters: cluster_0043

Target Alias Description ECC score Gene Family Method Actions
Bradi2g53220 No alias ribosomal protein L24 0.05 Orthogroups_2024-Update
Bradi3g38917 No alias ribosomal protein L24 0.04 Orthogroups_2024-Update
Brara.D00556.1 No alias component *(eL24) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.E00829.1 No alias component *(eL24) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.G01568.1 No alias component *(eL24) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.I03601.1 No alias component *(eL24) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre09.g391097 No alias Ribosomal protein L24e family protein 0.01 Orthogroups_2024-Update
Glyma.03G189300 No alias ribosomal protein L24 0.02 Orthogroups_2024-Update
Glyma.13G151600 No alias ribosomal protein L24 0.04 Orthogroups_2024-Update
HORVU3Hr1G080130.4 No alias component *(eL24) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
PSME_00007704-RA No alias (p50888|rl24_horvu : 205.0) 60S ribosomal protein L24 -... 0.04 Orthogroups_2024-Update
Potri.012G139400 No alias ribosomal protein L24 0.02 Orthogroups_2024-Update
Pp1s5_366V6 No alias 60s ribosomal protein l24 0.02 Orthogroups_2024-Update
Pp1s63_123V6 No alias 60s ribosomal protein l24 0.02 Orthogroups_2024-Update
Sobic.009G177700.1 No alias component *(eL24) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Solyc09g008800 No alias 60S ribosomal protein L24 (AHRD V3.3 *** RL24_PRUAV) 0.03 Orthogroups_2024-Update
Solyc10g085480 No alias 60S ribosomal protein L24 (AHRD V3.3 *** RL24_PRUAV) 0.03 Orthogroups_2024-Update
Sopen10g034910 No alias Ribosomal protein L24e 0.03 Orthogroups_2024-Update
evm.model.contig_2706.7 No alias (at3g53020 : 122.0) RPL24B encodes ribosomal protein... 0.02 Orthogroups_2024-Update
evm.model.tig00001093.9 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000176 nuclear exosome (RNase complex) IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 4 67
No external refs found!