Description : NAC domain transcription factor, putative, expressed
Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os01g60020 | |
Cluster | HCCA clusters: cluster_0084 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi3g59866 | No alias | NAC (No Apical Meristem) domain transcriptional... | 0.03 | Orthogroups_2024-Update | |
Glyma.12G221500 | No alias | NAC domain containing protein 3 | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G090440.4 | No alias | NAC-type transcription factor | 0.02 | Orthogroups_2024-Update | |
PSME_00050750-RA | No alias | (at1g52880 : 206.0) Transcription factor with a NAC... | 0.02 | Orthogroups_2024-Update | |
Pp1s140_93V6 | No alias | nac domain ipr003441 | 0.02 | Orthogroups_2024-Update | |
Sobic.008G094700.1 | No alias | NAC-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Sopen05g003630 | No alias | No apical meristem (NAM) protein | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003919 | FMN adenylyltransferase activity | IEP | Predicted GO |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
MF | GO:0005542 | folic acid binding | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Predicted GO |
CC | GO:0031361 | integral component of thylakoid membrane | IEP | Predicted GO |
MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
MF | GO:0033218 | amide binding | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
MF | GO:0072341 | modified amino acid binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003441 | NAC-dom | 22 | 148 |
No external refs found! |