LOC_Os01g60020


Description : NAC domain transcription factor, putative, expressed


Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g60020
Cluster HCCA clusters: cluster_0084

Target Alias Description ECC score Gene Family Method Actions
Bradi3g59866 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Glyma.12G221500 No alias NAC domain containing protein 3 0.03 Orthogroups_2024-Update
HORVU3Hr1G090440.4 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
PSME_00050750-RA No alias (at1g52880 : 206.0) Transcription factor with a NAC... 0.02 Orthogroups_2024-Update
Pp1s140_93V6 No alias nac domain ipr003441 0.02 Orthogroups_2024-Update
Sobic.008G094700.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Sopen05g003630 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003919 FMN adenylyltransferase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
CC GO:0031360 intrinsic component of thylakoid membrane IEP Predicted GO
CC GO:0031361 integral component of thylakoid membrane IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 22 148
No external refs found!