LOC_Os01g60730


Description : RING-H2 finger protein, putative, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g60730
Cluster HCCA clusters: cluster_0005

Target Alias Description ECC score Gene Family Method Actions
A4A49_09968 No alias ring-h2 finger protein atl78 0.02 Orthogroups_2024-Update
A4A49_39617 No alias ring-h2 finger protein atl1 0.02 Orthogroups_2024-Update
At5g07040 No alias Putative RING-H2 finger protein ATL69... 0.03 Orthogroups_2024-Update
Bradi2g06870 No alias AtL5 0.02 Orthogroups_2024-Update
Bradi4g37430 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.E00933.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G01087.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os06g34650 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_31462g0010 No alias (at1g49220 : 101.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_3380g0010 No alias (at1g49230 : 140.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.002G006400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G389200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.002G416300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G251000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G193000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc11g005290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.03 Orthogroups_2024-Update
Sopen01g038970 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen02g016820 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen04g004890 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001310 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen12g029870 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 124 166
No external refs found!