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Description : zinc finger, C3HC4 type domain containing protein, expressed
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os01g61470 | |
| Cluster | HCCA clusters: cluster_0031 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g22500 | No alias | E3 ubiquitin-protein ligase ATL15... | 0.02 | Orthogroups_2024-Update | |
| At1g35330 | No alias | RING/U-box superfamily protein [Source:TAIR;Acc:AT1G35330] | 0.02 | Orthogroups_2024-Update | |
| At5g27420 | No alias | E3 ubiquitin-protein ligase ATL31... | 0.02 | Orthogroups_2024-Update | |
| Bradi4g13960 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A02910.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.E00161.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.E00442.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.E01533.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.I03307.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G004519 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G050774 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G203400 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.05G188900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G242500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G176200 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G069670.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G074210.1 | No alias | regulatory ubiquitin-protein ligase *(PRU2) | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G082830.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| MA_12363g0010 | No alias | (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
| MA_159453g0010 | No alias | (at1g49230 : 134.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_9591879g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| MA_98187g0010 | No alias | (at1g72200 : 119.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00003016-RA | No alias | (at1g72200 : 114.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00051567-RA | No alias | (at3g16720 : 108.0) RING-H2 protein induced after... | 0.01 | Orthogroups_2024-Update | |
| Potri.009G110000 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G064700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.1G197500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.1G279400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.7G095300.1 | No alias | regulatory ubiquitin-protein ligase *(PRU2) &... | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G110300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G110400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G110500.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sopen03g033270 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00000076.143 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Predicted GO |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Predicted GO |
| BP | GO:0006101 | citrate metabolic process | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Predicted GO |
| MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
| MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
| CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 126 | 169 |
| No external refs found! |