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  5. Solyc01g080070

Solyc01g080070


Description : Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* AT3G06130.1)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g080070
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Bradi3g35490 No alias Chloroplast-targeted copper chaperone protein 0.03 Orthogroups_2024-Update
Brara.A03735.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.03G212400 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G180500 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G072500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G004420.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G114920.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G040920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g20000 No alias heavy metal-associated domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00053933-RA No alias (at3g56891 : 120.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
Potri.010G024700 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Seita.5G085100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G138300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G140600.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sopen01g031850 No alias Heavy-metal-associated domain 0.07 Orthogroups_2024-Update
Sopen01g053640 No alias Heavy-metal-associated domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
CC GO:0000922 spindle pole IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005815 microtubule organizing center IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0007020 microtubule nucleation IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 33 89
No external refs found!