Description : recA protein, putative, expressed
Gene families : OG_42_0002776 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002776_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os01g67510 | |
Cluster | HCCA clusters: cluster_0059 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g57827 | No alias | recA DNA recombination family protein | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G089020.10 | No alias | recombinase *(RecA) | 0.04 | Orthogroups_2024-Update | |
Potri.018G067900 | No alias | recA DNA recombination family protein | 0.03 | Orthogroups_2024-Update | |
Seita.8G108200.1 | No alias | recombinase *(RecA) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEA | InterProScan predictions |
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint | IEP | Predicted GO |
BP | GO:0000077 | DNA damage checkpoint | IEP | Predicted GO |
BP | GO:0002097 | tRNA wobble base modification | IEP | Predicted GO |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predicted GO |
MF | GO:0003713 | transcription coactivator activity | IEP | Predicted GO |
MF | GO:0004609 | phosphatidylserine decarboxylase activity | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
BP | GO:0019321 | pentose metabolic process | IEP | Predicted GO |
BP | GO:0019566 | arabinose metabolic process | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
CC | GO:0030896 | checkpoint clamp complex | IEP | Predicted GO |
BP | GO:0031570 | DNA integrity checkpoint | IEP | Predicted GO |
CC | GO:0033588 | Elongator holoenzyme complex | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
BP | GO:0046373 | L-arabinose metabolic process | IEP | Predicted GO |
MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013765 | DNA_recomb/repair_RecA | 68 | 331 |
No external refs found! |