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  5. LOC_Os01g72330

LOC_Os01g72330


Description : OsRR4 type-A response regulator, expressed


Gene families : OG_42_0000253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g72330
Cluster HCCA clusters: cluster_0105

Target Alias Description ECC score Gene Family Method Actions
A4A49_19485 No alias two-component response regulator arr8 0.02 Orthogroups_2024-Update
Brara.C02114.1 No alias A-type ARR response regulator of cytokinin signalling 0.03 Orthogroups_2024-Update
GRMZM2G319187 No alias response regulator 9 0.03 Orthogroups_2024-Update
Glyma.04G177900 No alias response regulator 6 0.02 Orthogroups_2024-Update
Glyma.05G033000 No alias response regulator 5 0.03 Orthogroups_2024-Update
Glyma.19G132300 No alias response regulator 9 0.03 Orthogroups_2024-Update
HORVU2Hr1G120490.2 No alias A-type ARR response regulator of cytokinin signalling 0.02 Orthogroups_2024-Update
Potri.006G041100 No alias response regulator 9 0.02 Orthogroups_2024-Update
Potri.019G133600 No alias response regulator 17 0.03 Orthogroups_2024-Update
Seita.7G318100.1 No alias A-type ARR response regulator of cytokinin signalling 0.02 Orthogroups_2024-Update
Sobic.005G030500.1 No alias A-type ARR response regulator of cytokinin signalling 0.02 Orthogroups_2024-Update
Sobic.006G090300.1 No alias A-type ARR response regulator of cytokinin signalling 0.02 Orthogroups_2024-Update
Sobic.006G090400.1 No alias A-type ARR response regulator of cytokinin signalling 0.02 Orthogroups_2024-Update
Solyc10g079700 No alias Two-component response regulator (AHRD V3.3 *** A0A059T9P7_ROSCN) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 12 141
No external refs found!