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  5. LOC_Os02g17350

LOC_Os02g17350


Description : VHS and GAT domain containing protein, expressed


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g17350
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
Brara.F01534.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Brara.H01294.1 No alias ubiquitin adaptor protein *(TOL) 0.05 Orthogroups_2024-Update
Brara.K00689.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
GRMZM2G023105 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
GRMZM2G077844 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
Glyma.06G082800 No alias ENTH/VHS/GAT family protein 0.04 Orthogroups_2024-Update
Glyma.14G143000 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G077230.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Solyc11g005460 No alias ENTH/VHS/GAT family protein (AHRD V3.3 *** AT5G63640.2) 0.05 Orthogroups_2024-Update
Sopen11g001470 No alias VHS domain 0.05 Orthogroups_2024-Update
Sopen11g028950 No alias VHS domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004152 GAT_dom 191 265
IPR002014 VHS_dom 5 129
No external refs found!