LOC_Os02g18070

Description : NB-ARC domain containing protein, expressed

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g18070
Cluster	HCCA clusters: cluster_0115

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23434	No alias	putative disease resistance protein rga3	0.03	Orthogroups_2024-Update
Glyma.03G048200	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.15G226100	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
HORVU0Hr1G031060.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Potri.003G200120	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.003G201900	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Potri.006G273900	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Solyc11g065810	No alias	Disease resistance protein (AHRD V3.3 - B3IYJ6_CAPCH)	0.02	Orthogroups_2024-Update
Sopen04g016200	No alias	hypothetical protein	0.04	Orthogroups_2024-Update
Sopen11g028670	No alias	hypothetical protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	227	427

External Links

No external refs found!