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  5. Solyc07g039330

Solyc07g039330


Description : Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT2G19520.1)


Gene families : OG_42_0003881 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g039330
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G350500 No alias Transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Potri.003G038800 No alias Transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 48 114
IPR001680 WD40_repeat 313 345
IPR001680 WD40_repeat 355 394
IPR001680 WD40_repeat 196 230
IPR001680 WD40_repeat 265 300
No external refs found!