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  5. LOC_Os02g38210

LOC_Os02g38210


Description : elongation factor Tu, putative, expressed


Gene families : OG_42_0001287 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os02g38210
Cluster HCCA clusters: cluster_0018

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G106061 No alias RAB GTPase homolog E1B 0.04 Orthogroups_2024-Update
Glyma.04G188700 No alias RAB GTPase homolog E1B 0.07 Orthogroups_2024-Update
Glyma.06G176900 No alias RAB GTPase homolog E1B 0.03 Orthogroups_2024-Update
HORVU6Hr1G053680.5 No alias translation elongation factor *(EF-Tu) 0.03 Orthogroups_2024-Update
MA_942991g0010 No alias (q43467|eftu1_soybn : 680.0) Elongation factor Tu,... 0.02 Orthogroups_2024-Update
Seita.1G218300.1 No alias translation elongation factor *(EF-Tu) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 68 269
IPR004161 EFTu-like_2 293 361
IPR004160 Transl_elong_EFTu/EF1A_C 366 465
No external refs found!