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  5. Solyc07g042130

Solyc07g042130


Description : Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061FYX7_THECC)


Gene families : OG_42_0009809 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009809_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g042130
Cluster HCCA clusters: Cluster_94


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 572 694
IPR002885 Pentatricopeptide_repeat 397 444
IPR002885 Pentatricopeptide_repeat 297 343
IPR002885 Pentatricopeptide_repeat 473 494
IPR002885 Pentatricopeptide_repeat 198 227
IPR002885 Pentatricopeptide_repeat 272 296
IPR002885 Pentatricopeptide_repeat 168 196
No external refs found!