- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : uncharacterized protein PA4923, putative, expressed
Gene families : OG_42_0000308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000308_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os02g41770 | |
| Cluster | HCCA clusters: cluster_0054 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.06G025200 | No alias | lysine decarboxylase family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G140900 | No alias | lysine decarboxylase family protein | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G124750.1 | No alias | cytokinin phosphoribohydrolase *(LOG) | 0.03 | Orthogroups_2024-Update | |
| PSME_00049942-RA | No alias | (at2g28305 : 174.0) LONELY GUY 1 (LOG1); CONTAINS... | 0.02 | Orthogroups_2024-Update | |
| Seita.5G290000.1 | No alias | cytokinin phosphoribohydrolase *(LOG) | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G004500.1 | No alias | cytokinin phosphoribohydrolase *(LOG) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Predicted GO |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Predicted GO |
| MF | GO:0010333 | terpene synthase activity | IEP | Predicted GO |
| BP | GO:0015858 | nucleoside transport | IEP | Predicted GO |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Predicted GO |
| MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
| MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
| MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| BP | GO:0035556 | intracellular signal transduction | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031100 | LOG_fam | 65 | 195 |
| No external refs found! |