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  5. LOC_Os02g42650

LOC_Os02g42650


Description : expansin precursor, putative, expressed


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g42650
Cluster HCCA clusters: cluster_0031

Target Alias Description ECC score Gene Family Method Actions
Bradi3g50740 No alias expansin B2 0.03 Orthogroups_2024-Update
Glyma.13G298100 No alias expansin B3 0.04 Orthogroups_2024-Update
PSME_00015392-RA No alias (at2g20750 : 239.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update
Seita.9G327000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G300400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 175 256
IPR009009 RlpA-like_DPBB 83 161
No external refs found!