Solyc07g042460


Description : Respiratory burst oxidase, putative (AHRD V3.3 *** B9RR53_RICCO)


Gene families : OG_42_0000215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g042460
Cluster HCCA clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Brara.F03043.1 No alias NADPH-oxidase *(Rboh) 0.02 Orthogroups_2024-Update
LOC_Os01g25820 No alias respiratory burst oxidase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00005550-RA No alias (at5g47910 : 1117.0) NADPH/respiratory burst oxidase... 0.03 Orthogroups_2024-Update
PSME_00024247-RA No alias (at1g64060 : 902.0) Interacts with AtrbohD gene to fine... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013121 Fe_red_NAD-bd_6 771 952
IPR013623 NADPH_Ox 165 267
IPR013112 FAD-bd_8 650 764
IPR013130 Fe3_Rdtase_TM_dom 496 606
No external refs found!