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  5. LOC_Os02g53530

LOC_Os02g53530


Description : ZOS2-17 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g53530
Cluster HCCA clusters: cluster_0045

Target Alias Description ECC score Gene Family Method Actions
A4A49_40363 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
At5g06650 No alias Zinc finger protein GIS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG05] 0.02 Orthogroups_2024-Update
Bradi4g01450 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Brara.B02398.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Brara.C01188.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.G03704.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Glyma.03G160700 No alias zinc finger protein 11 0.02 Orthogroups_2024-Update
Glyma.03G217900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G094200 No alias zinc finger protein 4 0.03 Orthogroups_2024-Update
Glyma.09G107400 No alias zinc finger protein 8 0.03 Orthogroups_2024-Update
Glyma.13G121000 No alias telomerase activator1 0.03 Orthogroups_2024-Update
Glyma.20G117800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G034650.6 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G077570.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
LOC_Os04g36650 No alias ZOS4-06 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_114098g0010 No alias (at1g67030 : 81.3) Encodes a zinc finger protein... 0.04 Orthogroups_2024-Update
MA_121523g0010 No alias (at1g66140 : 110.0) Encodes a zinc finger protein... 0.06 Orthogroups_2024-Update
Potri.008G138000 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
Potri.014G178200 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Pp1s2_490V6 No alias transcriptional regulator 0.02 Orthogroups_2024-Update
Seita.9G388200.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Solyc06g061160 No alias LOW QUALITY:Zinc finger, C2H2 (AHRD V3.3 *** A0A103XFH7_CYNCS) 0.03 Orthogroups_2024-Update
Solyc08g077000 No alias LOW QUALITY:Zinc finger, C2H2 (AHRD V3.3 *** A0A103XFH7_CYNCS) 0.03 Orthogroups_2024-Update
Solyc10g078990 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen04g006700 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!